Investigations
Top-level organization for sequencing projects
ACE
ActiveMulti-modal investigation of the robustness of a SARS-COV-2 vaccination course with booster on immunocompromised individuals undergoing RTX and MMF tr...
Ahmed.Dan.scRNA.D5_2022
CompletedSequencing project: Ahmed.Dan.scRNA.D5_2022
Ahmed.Masao - PDL1 and IL2 combination therapy in CD8 T cells
CompletedMasao Hashimoto's project on PDL1 and IL2 mono- and combination therapies and their effects on CD8+ T cells in mice in the context of LCMV
CD43neg.SplenicBcells_2022
CompletedSequencing project: CD43neg.SplenicBcells_2022
Cameron IFNG
CompletedCameron Robinson's PhD work on Interferon gamma effects in epithelial crosstalk to lung CD8 TRM
Day_CD4.TB_2023
On HoldSequencing project: Day_CD4.TB_2023
F1_Hybrid_SPRET_B6
ActiveCarly Roman's PhD project
Female Reproductive Tract - Endometrial Remodeling
ActiveHuman Lung CD8 TRM
On HoldThis investigation seeks to understand the transcriptomic and epigenetic heterogeneity of single positive (CD69+CD103-) CD8+ TRM in the human lung.
Imprint
ActiveThis investigation seeks to understand the effects of maternal antibodies on infant responses to first encounters of influenza from transcriptomic, ep...
Katia - COVID vaccinated SLE individuals
CompletedSingle cell analysis of Spike++ B cells and B and T cell populations isolated from SARS-CoV-2 mRNA vaccinated Healthy Donors (HD) and Systemic Lupus E...
Keenan - B cell fate
CompletedKeenan Wiggins' PhD project on B cell fate control
Kirsten - Generation of Upper Respiratory Tract TRM
ActiveKirsten Kost's PhD project investigating the generation of CD8+ TRM in the upper respiratory tract
Kohlmeier.Ida_2021
CompletedSequencing project: Kohlmeier.Ida_2021
Kohlmeier_mm10_BAL.LG.SPL_2022
CompletedSequencing project: Kohlmeier_mm10_BAL.LG.SPL_2022
LEA_day14_flu_PC_sc.11.2022
CompletedSequencing project: LEA_day14_flu_PC_sc.11.2022
LN.LG.MBC.ASC_2022
CompletedSequencing project: LN.LG.MBC.ASC_2022
LRA
ActiveLupus Research Alliance multi-omics study
Lung.B.Tcell.ATAC_2021
CompletedSequencing project: Lung.B.Tcell.ATAC_2021
MAPseq Pilot
CompletedMISC
ActiveLongitudinal study of Multi-system Inflammatory Syndrome in Children (MIS-C). Samples were collected from children at acute infection before IVIG or s...
Roy_perturbseq
ActiveRoy Mulpur's PhD project
Sarah Michalets - Impact of Respiratory Tract Resident Memory CD8 T Cells on Viral Transmission
CompletedSarah Michalet's PhD project
Scharer.LPS.NP-Ficoll.scRNA_2021
CompletedSequencing project: Scharer.LPS.NP-Ficoll.scRNA_2021
Shanmuganathan.Deepak_2023
CompletedSequencing project: Shanmuganathan.Deepak_2023
Singh.Monica_LEAP
CompletedSequencing project: Singh.Monica_LEAP
Singh.Monica_organoid_2023
CompletedSequencing project: Singh.Monica_organoid_2023
Tam_Run1
ActiveSequencing project: Tam_Run1
Walter.MAPseq
ActiveSequencing project: Walter.MAPseq
Walter_scRNA_2022
ActiveSequencing project: Walter_scRNA_2022