Investigations
Top-level organization for sequencing projects
ACE
ActiveMulti-modal investigation of the robustness of a SARS-COV-2 vaccination course with booster on immunocompromised individuals undergoing RTX and MMF tr...
Ahmed.Dan.scRNA.D5_2022
CompletedSequencing project: Ahmed.Dan.scRNA.D5_2022
Ahmed.Masao - PDL1 and IL2 combination therapy in CD8 T cells
CompletedMasao Hashimoto's project on PDL1 and IL2 mono- and combination therapies and their effects on CD8+ T cells in mice in the context of LCMV
CD43neg.SplenicBcells_2022
CompletedSequencing project: CD43neg.SplenicBcells_2022
Cameron IFNG
ActiveCameron Robinson's PhD work on Interferon gamma effects in epithelial crosstalk to lung CD8 TRM
Day_CD4.TB_2023
On_holdSequencing project: Day_CD4.TB_2023
F1_Hybrid_SPRET_B6
ActiveCarly Roman's PhD project
Female Reproductive Tract - Endometrial Remodeling
ActiveHysterectomy from 3 human donors, with samples from uterus, endocervical tissue, and ectocervical tissue. Cells sorted on bulk live leukocytes with CD...
Human Lung CD8 TRM
ActiveThis investigation seeks to understand the transcriptomic and epigenetic heterogeneity of single positive (CD69+CD103-) CD8+ TRM in the human lung.
Imprint
On_holdThis investigation seeks to understand the effects of maternal antibodies on infant responses to first encounters of influenza from transcriptomic, ep...
Katia - COVID vaccinated SLE individuals
CompletedSingle cell analysis of Spike++ B cells and B and T cell populations isolated from SARS-CoV-2 mRNA vaccinated Healthy Donors (HD) and Systemic Lupus E...
Keenan - B cell fate
CompletedKeenan Wiggins' PhD project on B cell fate control
Kirsten - Generation of Upper Respiratory Tract TRM
ActiveKirsten Kost's PhD project investigating the generation of CD8+ TRM in the upper respiratory tract
Kohlmeier.Ida_2021
CompletedSequencing project: Kohlmeier.Ida_2021
Kohlmeier_mm10_BAL.LG.SPL_2022
CompletedSequencing project: Kohlmeier_mm10_BAL.LG.SPL_2022
LEA_day14_flu_PC_sc.11.2022
CompletedSequencing project: LEA_day14_flu_PC_sc.11.2022
LN.LG.MBC.ASC_2022
CompletedSequencing project: LN.LG.MBC.ASC_2022
LRA
ActiveLupus Research Alliance multi-omics study
Lung.B.Tcell.ATAC_2021
CompletedSequencing project: Lung.B.Tcell.ATAC_2021
MAPseq Pilot
CompletedMISC
ActiveLongitudinal study of Multi-system Inflammatory Syndrome in Children (MIS-C). Samples were collected from children at acute infection before IVIG or s...
Roy_perturbseq
ActiveRoy Mulpur's PhD project
Sarah Michalets - Impact of Respiratory Tract Resident Memory CD8 T Cells on Viral Transmission
CompletedSarah Michalet's PhD project
Scharer.LPS.NP-Ficoll.scRNA_2021
CompletedSequencing project: Scharer.LPS.NP-Ficoll.scRNA_2021
Shanmuganathan.Deepak_2023
CompletedSequencing project: Shanmuganathan.Deepak_2023
Singh.Monica_LEAP
CompletedSequencing project: Singh.Monica_LEAP
Singh.Monica_organoid_2023
CompletedSequencing project: Singh.Monica_organoid_2023
Tam_Run1
ActiveSequencing project: Tam_Run1
Walter.MAPseq
ActiveSequencing project: Walter.MAPseq
Walter_scRNA_2022
ActiveSequencing project: Walter_scRNA_2022